Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927055.1_cds_XP_016474958.1_66933
CDS Infomation

[gene=LOC107796678] [db_xref=GeneID:107796678] [protein=glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic isoform X2] [protein_id=XP_016474958.1] [location=join(28899..28911,29015..29112,29356..29517,29646..29813,30430..30590,30686..30747,30869..30918,31032..31438,31575..31707)] [gbkey=CDS]
Sequence

ATGCTTCTCCAAGTAGCCGAGTTCTCTGGTCTTCGATCAAGTGGATGTGTGACATTTTCG
AATAGGGAGTCGTCCTTCTTTGATGTTGTGTCTGCTCAACTCACTCCCAAGACCACAGGA
TCAGCTCCTGTGAAGGGAGAAACTGTTGCAAAATTGAAGGTTGCTATCAATGGGTTTGGA
CGCATTGGCAGGAATTTCCTCCGTTGTTGGCATGGCCGCAAAGATTCACCACTGGATGTC
ATCGTCGTCAATGACAGTGGTGGTGTCAAGAATGCATCTCACTTGCTTAAGTACGATTCC
ATGCTCGGAACATTCAAGGCTGATGTGAAAATAGTGGATAATGAAACCATTAGCGTTGAC
GGAAAGCACATCAAGGTTGTCTCTAGCAGGGACCCTCTTAAACTTCCTTGGGCTGAACTT
GGCATTGACATTGTTATTGAGGGAACCGGTGTGTTTGTTGATGGTCCGGGTGCTGGGAAG
CACATCCAAGCTGGTGCTAAGAAAGTTATCATCACTGCTCCAGCAAAAGGTGCTGATATT
CCTACCTATGTTGTTGGAGTGAACGAACAAGACTACTCTCACGAGGTTGCTAATATCGTA
AGCAATGCCTCTTGCACTACTAACTGCTTGGCTCCTTTTGTCAAAGTCATGGATGAAGAA
TTCGGTATTGTTAAGGGTACAATGACAACAACTCACTCTTACACCGGAGATCAGAGGCTT
CTGGATGCTTCACACCGTGACTTGAGGAGAGCGAGAGCTGCAGCGTTGAACATAGTCCCG
ACCAGCACTGGTGCAGCCAAGGCCGTGTCTCTAGTGCTACCCCAGCTCAAGGGCAAGCTC
AATGGCATTGCTCTCCGAGTGCCAACACCTAATGTTTCGGTCGTTGACCTCGTTGTCAAC
GTTGAGAAGAAAGGAATTTCAGCTGAAGATGTCAATGCAGCTTTCAGAAAGGCAGCTGAC
GGTCCATTGAATGGCATATTGGCTGTTTGTGATGTTCCACTCGTGTCAGTTGATTTCCGA
TGCAGTGATGTTTCCTCCACCATCGACTCCTCTTTGACCATGGTTATGGGAGACGACATG
GTCAAGGTTGTCGCTTGGTATGATAACGAGTGGGGATACAGCCAACGTGTGGTTGACTTG
GCTCATCTGGTAGCAAGCAAATGGCCTGGTTCATCTGTGGAAGGAAGTGGAGACTCCTTG
GAGGACTACTGCAAGACTAACCCTGCTGACAAGGAGTGCAAAGTCTACGAATAA

Peptide Sequence

PEP ID

XP_016474958.1
PEP Infomation

PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic isoform X2 [Nicotiana tabacum]
Sequence

MLLQVAEFSGLRSSGCVTFSNRESSFFDVVSAQLTPKTTGSAPVKGETVAKLKVAINGFG
RIGRNFLRCWHGRKDSPLDVIVVNDSGGVKNASHLLKYDSMLGTFKADVKIVDNETISVD
GKHIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADI
PTYVVGVNEQDYSHEVANIVSNASCTTNCLAPFVKVMDEEFGIVKGTMTTTHSYTGDQRL
LDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVN
VEKKGISAEDVNAAFRKAADGPLNGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDM
VKVVAWYDNEWGYSQRVVDLAHLVASKWPGSSVEGSGDSLEDYCKTNPADKECKVYE

Transcript Sequence

Gene sequence data has not been registered.